Thermoproteaceae

Thermoproteaceae
Scientific classification
Domain:	Archaea
Phylum:	Crenarchaeota
Class:	Thermoprotei
Order:	Thermoproteales
Family:	Thermoproteaceae; Zillig & Stetter 1982 emend. Burggraf et al. 1997
Genera
	Caldivirga Itoh et al. 1999; Pyrobaculum Huber et al. 1988; Thermocladium Itoh et al. 1998; Thermoproteus Zillig and Stetter 1982; Vulcanisaeta Itoh et al. 2002;

In taxonomy, the Thermoproteaceae are a family of the Thermoproteales.^[1]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[2] and National Center for Biotechnology Information (NCBI)^[3] and the phylogeny is based on 16S rRNA-based LTP release 106 by The All-Species Living Tree Project ^[4]

	Caldivirga maquilingensis Itoh et al. 1999

	Thermocladium modestius Itoh et al. 1998

Vulcanisaeta

	?V. moutnovskia Prokofeva 2006

	V. distributa Itoh et al. 2002 (type sp.)

	V. souniana Itoh et al. 2002

Thermoproteus

	?T. uzoniensis ♦ Bonch-Osmolovskaya et al. 2001

	T. tenax Zillig and Stetter 1982 (type sp.)

Pyrobaculum

?P. neutrophilum ♠ Hensel et al. 1996

?P. islandicum Huber et al. 1988 (type sp.)

?P. organotrophum Huber et al. 1988

P. aerophilum Völkl et al. 1996

P. calidifontis Amo et al. 2008

P. yellowstonensis Jay et al. 2015

Thermoproteus neutrophilus Stetter and Zillig 1989

	P. arsenaticum Huber et al. 2001

	P. oguniense Sako et al. 2001

Notes:
♠ Strain found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN) ♦ Strain not found, not available or lost

References

^ See the NCBI webpage on Thermoproteaceae. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Retrieved 2007-03-19.
^ J.P. Euzéby. "Thermoproteaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. Archived from the original on 2013-01-27. Retrieved 2011-11-17.
^ Sayers; et al. "Thermoproteaceae". National Center for Biotechnology Information (NCBI) taxonomy database [2]. Retrieved 2011-06-05.
^ All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database [3]. Retrieved 2011-11-17.

Jay ZJ, JP Beam, MA Kozubal, Rdem Jennings, DB Rusch, and Inskeep WP. (December 2016). "The distribution, diversity and function of predominant Thermoproteales in high-temperature environments of Yellowstone National Park". Environmental Microbiology. 18 (12): 4755–4769. doi:10.1111/1462-2920.13366. PMID 27130276.
Jay ZJ and Inskeep WP. (July 2015). "The distribution, diversity, and importance of 16S rRNA gene introns in the order Thermoproteales". Biology Direct. 10 (35): 35. doi:10.1186/s13062-015-0065-6. PMC 4496867. PMID 26156036.
Jay, Z.J.; J.P. Beam; A. Dohnalkova; R. Lohmayer; B. Bodle; B. Planer-Friedrich; M. Romine; W. P. Inskeep (2015). "Pyrobaculum yellowstonensis Strain WP30 Respires on Elemental Sulfur and/or Arsenate in Circumneutral Sulﬁdic Geothermal Sediments of Yellowstone National Park". Appl. Environ. Microbiol. 81 (17): 5907–5916. doi:10.1128/AEM.01095-15. PMC 4551270. PMID 26092468.
Judicial Commission of the International Committee on Systematics of Prokaryotes (2005). "The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobacterium, Methanobacterium, Methanococcus, Methanomicrobium, Planctomyces, Prochloron, Sulfolobus, Thermococcus, Thermoproteus and Verrucomicrobium, respectively. Opinion 79". Int. J. Syst. Evol. Microbiol. 55 (Pt 1): 517–518. doi:10.1099/ijs.0.63548-0. PMID 15653928.
Burggraf S; Huber H; Stetter KO (1997). "Reclassification of the crenarchael orders and families in accordance with 16S rRNA sequence data". Int. J. Syst. Bacteriol. 47 (3): 657–660. doi:10.1099/00207713-47-3-657. PMID 9226896.
Zillig W; Stetter KO; Schafer W; Janekovic D; Wunderl S; Holz I; et al. (1981). "Thermoproteales: a novel type of extremely thermoacidophilic anaerobic archaebacteria isolated from Icelandic solfataras". Zentralbl. Mikrobiol. Parasitenkd. Infektionskr. Hyg. Abt. 1 Orig. C2: 205–227.
Zillig W; Tu J; Holz I (1981). "Thermoproteales--a third order of thermoacidophilic archaebacteria". Nature. 293 (5827): 85–86. doi:10.1038/293085a0. PMID 6791033.

Scientific books

Scientific databases

External links

[1] See the NCBI webpage on Thermoproteaceae. Data extracted from the "NCBI taxonomy resources". National Center for Biotechnology Information. Retrieved 2007-03-19.

[2] J.P. Euzéby. "Thermoproteaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN) [1]. Archived from the original on 2013-01-27. Retrieved 2011-11-17.

[3] Sayers; et al. "Thermoproteaceae". National Center for Biotechnology Information (NCBI) taxonomy database [2]. Retrieved 2011-06-05.

[4] All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database [3]. Retrieved 2011-11-17.

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