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Heptad repeat

The heptad repeat is an example of a structural motif that consists of a repeating pattern of seven amino acids:

 a b c d e f g H P P H C P C 

where H represents hydrophobic residues, C represents, typically, charged residues, and P represents polar (and, therefore, hydrophilic) residues. The positions of the heptad repeat are commonly denoted by the lowercase letters a through g.

These motifs are the basis for most coiled coils and, in particular, leucine zippers, which have predominantly leucine in the d position of the heptad repeat.[1]

References

  1. ^ Chambers P, Pringle CR, Easton AJ (1990). "Heptad repeat sequences are located adjacent to hydrophobic regions in several types of virus fusion glycoproteins". The Journal of General Virology. 71 (12): 3075–80. doi:10.1099/0022-1317-71-12-3075. PMID 2177097.
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