The National Collegiate Athletic Association football championship is held every early part of the year (January).
The football season is divided into two conferences (tournaments). Out of the eight NCAA schools, only four fields a team in the football tournament.
The teams face each other once every conference. The teams with the most points on the league table advances in the Championship game.
If a team wins both conferences, the Championship game is omitted, and the winning team from both conferences is the champion.
Champions
Denotes school won double crowns
| Academic Year | Juniors' | Seniors' |
|---|---|---|
| 1924-1925 |  De La Salle College (1) |  Ateneo de Manila (1) |
| 1925-1926 |  San Beda College (1) | ){kind=small} Saint Vincent de Paul (1) |
| 1926-1927 | De La Salle College (2) |  University of Santo Tomas (1) |
| 1927-1928 | De La Salle College (3) | University of Santo Tomas (2) |
| 1928-1929 | De La Salle College (4) | University of Santo Tomas (3) |
| 1929-1930 | De La Salle College (5) | University of Santo Tomas (4) |
| 1930-1931 | Not Held | Not Held |
| 1931-1932 | ||
| 1932-1933 | De La Salle College (6) | De La Salle College (1) |
| 1933-1934 | De La Salle College (7) | De La Salle College (2) |
| 1934-1935 | De La Salle College (8) | De La Salle College (3) |
| 1935-1936 | De La Salle College (9) | De La Salle College (4) |
| 1936-1937 | Ateneo de Manila (1) | De La Salle College (5) |
| 1937-1938 | De La Salle College (10) | De La Salle College (6) |
| 1938-1939 | De La Salle College (11) | De La Salle College (7) |
| 1939-1940 | De La Salle College (12) | De La Salle College (8) |
| 1940-1941 | De La Salle College (13) | De La Salle College (9) |
| 1941-1942 | De La Salle College (14) | Ateneo de Manila (2) |
| 1942-1947 | Not held due to World War II | |
| 1947-1948 |  Colegio de San Juan de Letran (1) | De La Salle College (10) |
| 1948-1949 | De La Salle College (15) | Colegio de San Juan de Letran (1) |
| 1949-1950 | De La Salle College (16) | De La Salle College (11) |
| 1950-1951 | Not Held | |
| 1951-1952 | Ateneo de Manila (2) | Ateneo de Manila (3) De La Salle College (12) |
| 1952-1953 |  Mapúa Institute of Technology (1) | De La Salle College (13) |
| 1953-1954 | Mapúa Institute of Technology (2) | Ateneo de Manila (4) |
| 1954-1955 | Mapúa Institute of Technology (3) | Ateneo de Manila (5) |
| 1955-1956 | De La Salle College (17) | Mapúa Institute of Technology (1) |
| 1956-1957 | San Beda College (2) | Colegio de San Juan de Letran (2) |
| 1957-1958 | De La Salle College (18) | Mapúa Institute of Technology (2) |
| 1958-1959 | Mapúa Institute of Technology (4) | Mapúa Institute of Technology (3) |
| 1959-1960 | Mapúa Institute of Technology (5) | Mapúa Institute of Technology (4) |
| 1960-1961 | De La Salle College (19) | Mapúa Institute of Technology (5) |
| 1961-1962 | Suspended | |
| 1962-1965 | Not Held | |
| 1965-1966 | Colegio de San Juan de Letran (2) | De La Salle College (14) |
| 1966-1967 | De La Salle College (20) | De La Salle College (15) |
| 1967-1968 | De La Salle College (21) | Ateneo de Manila University (6) |
| 1968-1969 | La Salle Green Hills (1) | San Beda College (1) |
| 1969-1970 | La Salle Green Hills (2) | San Beda College (2) |
| 1970-1971 | San Beda College (3) | Mapúa Institute of Technology (6) |
| 1971-1972 | La Salle Green Hills (3) | De La Salle College (16) |
| 1972-1973 | La Salle Green Hills (4) | De La Salle College (17) |
| 1973-1974 | Not Held | |
| 1974-1975 | La Salle Green Hills (5) | De La Salle College (18) |
| 1975-1976 | La Salle Green Hills (6) | De La Salle University (19) |
| 1976-1977 | La Salle Green Hills (7) | De La Salle University (20) |
| 1977-1978 | Ateneo de Manila University (3) | De La Salle University (21) |
| 1978-1979 | Suspended | |
| 1979-1980 | La Salle Green Hills (8) | Mapúa Institute of Technology (7) |
| 1980-1981 | La Salle Green Hills (9) | Mapúa Institute of Technology (8) |
| 1981-1982 | Mapúa Institute of Technology (6) | Mapúa Institute of Technology (9) |
| 1982-1983 | San Beda College (4) | San Beda College (3) |
| 1983-1984 | Not Held | Colegio de San Juan de Letran (3) |
| 1984-1985 | Mapúa Institute of Technology (10) | |
| 1985-1986 | Colegio de San Juan de Letran (4) | |
| 1986-1987 | Colegio de San Juan de Letran (5) | |
| 1987-1988 | Colegio de San Juan de Letran (3) | Mapúa Institute of Technology (11) |
| 1988-1989 | Colegio de San Juan de Letran (4) | Colegio de San Juan de Letran (6) |
| 1989-1990 | San Beda College (5) |  Perpetual Help College of Rizal (1) |
| 1990-1991 | San Beda College (6) | San Beda College (4) |
| 1991-1992 | San Beda College (7) | San Beda College (5) |
| 1992-1993 | San Beda College (8) | San Beda College (6) |
| 1993-1994 | San Beda College (9) | San Beda College (7) |
| 1994-1995 | San Beda College (10) | San Beda College (8) |
| 1995-1996 | San Beda College (11) | San Beda College (9) |
| 1996-1997 | San Beda College (12) | University of Perpetual Help Rizal (2) |
| 1997-1998 | San Beda College (13) | Colegio de San Juan de Letran (7) |
| 1998-1999 | San Beda College (14) |  Philippine Christian University (1) |
| 1999-2000 | Mapúa Institute of Technology (7) | Philippine Christian University (2) |
| 2000-2001 |  La Salle Green Hills (10) | Philippine Christian University (3) |
| 2001-2002 | Colegio de San Juan de Letran (5) | San Beda College (10) |
| 2002-2003 | La Salle Green Hills (11) | San Beda College (11) |
| 2003-2004 | La Salle Green Hills (12) | San Beda College (12) |
| 2004-2005 | La Salle Green Hills (13) | San Beda College (13) |
| 2005-2006 | La Salle Green Hills (14) | San Beda College (14) |
| 2006-2007 | La Salle Green Hills (15) | San Beda College (15) |
| 2007-2008 | La Salle Green Hills (16) | San Beda College (16) |
| 2008-2009 | La Salle Green Hills (17) | San Beda College (17) |
| 2009-2010 | La Salle Green Hills (18) | De La Salle–College of Saint Benilde (1) |
| 2010-2011 | La Salle Green Hills (19) | San Beda College (18) |
| 2011-2012 | La Salle Green Hills (20) | San Beda College (19) |
| 2012-2013 | San Beda College–Rizal (15) | San Beda College (20) |
| 2013-2014 | San Beda College–Rizal (16) | San Beda College (21) |
| 2014-2015 | La Salle Green Hills (21) | San Beda College (22) |
| 2015-2016 | La Salle Green Hills (22) |  Arellano University (1) |
| 2016-2017 | San Beda College–Rizal (17) | San Beda College (23) |
| 2017-2018 | San Beda College–Rizal (18) | De La Salle–College of Saint Benilde (2) |
| 2018-2019 | San Beda University (24) | |
Number of championships by school
The school left the league
| School | Juniors' | Seniors' | Total |
|---|---|---|---|
| San Beda University | 16 | 24 | 40 |
| Mapúa University | 7 | 12 | 19 |
| De La Salle–College of Saint Benide – La Salle Green Hills | 13 | 2 | 15 |
| Colegio de San Juan de Letran | 5 | 7 | 12 |
| University of Perpetual Help System DALTA | 0 | 2 | 2 |
| Arellano University | 0 | 1 | 1 |
| De La Salle University – La Salle Greenhills | 30 | 21 | 51 |
| Ateneo de Manila University | 3 | 6 | 9 |
| University of Santo Tomas | 0 | 4 | 4 |
| Philippine Christian University | 0 | 3 | 3 |
| Saint Vincent de Paul | 0 | 1 | 1 |
Notes:
- LSGH won nine (9) titles as a junior to DLSU (1969–1981) and thirteen (13) titles as a junior to CSB (1998–present).